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Technology · Precision editing

Prime Editing

Writes a new stretch of DNA sequence directly into a chosen site, using a guide that carries the replacement text with it.

Phase I/II DNAno double-strand breakclinical
Clinical research Being tested in people in registered clinical trials. Being in trials is not evidence that a treatment works or is safe.

Giải thích đơn giản

Base editing is a pencil that can change one letter. Prime editing is closer to find-and-replace in a word processor: the guide carries both the address and the new text, and the machine writes that text straight into the DNA. It can swap letters, add a few, or remove a few — and it does it without cutting the double helix all the way through.

Tìm hiểu sâu hơn

A prime editor is a Cas9 nickase fused to an engineered reverse transcriptase, directed by a prime editing guide RNA (pegRNA) that both specifies the target and templates the new sequence. The nickase cuts one strand; the exposed 3' end binds a primer-binding site in the pegRNA; the reverse transcriptase copies the pegRNA's template directly onto the genomic strand. Flap resolution and mismatch repair install the edit. Developed in David Liu's laboratory and published in 2019.

Why it matters

In principle prime editing can install all twelve base-to-base substitutions plus small insertions and deletions — a far wider range than base editing, without the double-strand break that Cas9 requires. Estimates at publication suggested it could in principle address the large majority of known pathogenic human variants. That is a statement about scope, not about what has been achieved in patients.

How it works

  1. A pegRNA directs the prime editor to the target and carries the replacement sequence in its own tail.
  2. The Cas9 nickase cuts a single strand, freeing a DNA end.
  3. That end pairs with the primer-binding site on the pegRNA.
  4. The reverse transcriptase copies the pegRNA template onto the DNA strand, physically writing the new sequence.
  5. The cell trims the resulting flap and repairs the strands, and the edit becomes permanent.
Where the analogy breaks down'Find and replace' is the right shape but the wrong difficulty. In a word processor the operation always works. Here, efficiency varies enormously between target sites and cell types, the editor is a large and awkward molecule to deliver, and designing a pegRNA that works well is still substantially empirical.
How it works
A prime editor writing new sequence directly onto a nicked DNA strand from a template it carries. Illustration generated for The CRISPR Atlas — a visual aid, not a photograph or a literal depiction of molecular structure.

Where it stands clinically

Prime editing reached patients later than base editing and the clinical dataset is correspondingly small. The milestone result is PM359 from Prime Medicine, an autologous stem-cell therapy in which prime editing corrects the delGT mutation causing p47phox-deficient chronic granulomatous disease. Results in the first participants were published in the New England Journal of Medicine, reporting prompt engraftment and durable restoration of the NADPH oxidase activity these patients lack — the first published evidence that a prime-edited therapy can work in a person.

That is two patients with early follow-up. It establishes that the approach can function clinically; it does not establish efficacy or safety in any general sense.

ImportantPrime editing is at the earliest clinical stage of the technologies on this site. No prime-editing medicine is approved anywhere.

Common questions

What is prime editing?

A gene-editing method that writes a chosen new stretch of DNA sequence into a specific place in the genome. Unlike ordinary CRISPR it does not cut both strands, and unlike base editing it can insert and delete sequence as well as swap letters.

Is prime editing being used in patients?

Yes, in early trials. The first published first-in-human prime-editing results came from PM359 in chronic granulomatous disease, in a very small number of participants with early follow-up. No prime-editing therapy has been approved.

Could prime editing fix most genetic diseases?

Its theoretical range covers the large majority of known disease-causing variants, which is why it attracts so much attention. Turning that range into medicines is a separate problem, and delivery to tissues beyond blood cells and liver is the hardest part of it.

Sources

Connected in the Atlas

Every entry on this site is linked to the others it relates to. These connections are part of the record, not a search result.

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